BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037B03SP1|AL430340
(874 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig655 882 0.0
3x_Contig724 519 e-147
>3x_Contig655
Length = 2459
Score = 882 bits (445), Expect = 0.0
Identities = 458/461 (99%), Gaps = 1/461 (0%)
Strand = Plus / Minus
Query: 415 aaattatggttttgacgacgtaattgggagagcttattatccaatgtgatatcttcagtc 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2459 aaattatggttttgacgacgtaattgggagagcttattatccaatgtgatatcttcagtc 2400
Query: 475 atcatcaaa-tcgtttagagccatctgagggtcaaatttctggtataaaatgagatcatc 533
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2399 atcatcaaaatcgtttagagccatctgagggtcaaatttctggtataaaatgagatcatc 2340
Query: 534 atgaatctggaaattcaaacaggcttccgagattagttgtgtgatttcttgagtgacaat 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2339 atgaatctggaaattcaaacaggcttccgagattagttgtgtgatttcttgagtgacaat 2280
Query: 594 ttctcgagatattccgactctttcggataggtaactaatttgtattttagttgctatcct 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2279 ttctcgagatattccgactctttcggataggtaactaatttgtattttagttgctatcct 2220
Query: 654 caaataaaatgcgtacatcttttgtctcatagtcttagatattatatcccactttttttc 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2219 caaataaaatgcgtacatcttttgtctcatagtcttagatattatatcccactttttttc 2160
Query: 714 taagaaataatcttgcttgcaaagccgctccatatcattgtgccaccagtcgaaaaactt 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2159 taagaaataatcttgcttgcaaagccgctccatatcattgtgccaccagtcgaaaaactt 2100
Query: 774 catgaacttactattaattataagtttgcccttgccagcaagaacatcaaagtgtttatg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2099 catgaacttactattaattataagtttgcccttgccagcaagaacatcaaagtgtttatg 2040
Query: 834 aaactgttctagttcttctaaatgaatgaatgtgtccaaat 874
||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 2039 aaactgttctagttcttataaatgaatgaatgtgtcaaaat 1999
>3x_Contig724
Length = 2144
Score = 519 bits (262), Expect = e-147
Identities = 272/274 (99%), Gaps = 1/274 (0%)
Strand = Plus / Plus
Query: 1 aaaataccccgnaatatttcaggaatattggaattcgtatcgaagatgatattgccattg 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1872 aaaataccccg-aatatttcaggaatattggaattcgtatcgaagatgatattgccattg 1930
Query: 61 gcctgaattcatacactaacttgacggttgaagcagctaaagaagtaattgacatcgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1931 gcctgaattcatacactaacttgacggttgaagcagctaaagaagtaattgacatcgaaa 1990
Query: 121 acattgttcagcatggtgtttctaccaaaatagatcacgacatacctcgtcctcttgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1991 acattgttcagcatggtgtttctaccaaaatagatcacgacatacctcgtcctcttgatt 2050
Query: 181 tctaacggttcgaaaatatttaaaagttatgtaatttcactagcatttatcatgtaaata 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2051 tctaacggttcgaaaatatttaacagttatgtaatttcactagcatttatcatgtaaata 2110
Query: 241 gaacaaaactacgtactctcttaatcattgaaag 274
||||||||||||||||||||||||||||||||||
Sbjct: 2111 gaacaaaactacgtactctcttaatcattgaaag 2144
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7233
Number of Sequences: 1807
Number of extensions: 7233
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 2
length of query: 874
length of database: 10,358,551
effective HSP length: 16
effective length of query: 858
effective length of database: 10,329,639
effective search space: 8862830262
effective search space used: 8862830262
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)